1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g04068

Lfl_g04068 (UVR3)


Aliases : UVR3

Description : 6-4-type photolyase *(UVR3) & original description: none


Gene families : OG0005526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005526_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04068
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Aev_g13790 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09961 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000391.2 UVR3 DNA damage response.DNA repair... 0.02 OrthoFinder output from all 47 species
Gb_03016 UVR3 (6-4)DNA photolyase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_03017 UVR3 (6-4)DNA photolyase OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp5g09330.1 UVR3 6-4-type photolyase (UVR3) 0.02 OrthoFinder output from all 47 species
Spa_g07765 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19732 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 5 165
IPR005101 Cryptochr/Photolyase_FAD-bd 292 488
No external refs found!