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  5. Ala_g36751

Ala_g36751


Description : not classified & original description: none


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g36751

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00247890 NRPC2,... DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aspi01Gene47963.t1 NRPC2, Aspi01Gene47963 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.05G020900.1 EMB1989, RPB2,... component *(NRPB2) of RNA polymerase II complex &... 0.01 OrthoFinder output from all 47 species
Nbi_g17872 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.03 OrthoFinder output from all 47 species
Pp3c15_19410V3.1 EMB1989, RPB2,... DNA-directed RNA polymerase family protein 0.02 OrthoFinder output from all 47 species
Pp3c16_10710V3.1 Pp3c16_10710 DNA-directed RNA polymerase family protein 0.01 OrthoFinder output from all 47 species
Pp3c21_8540V3.1 NRPC2, Pp3c21_8540 nuclear RNA polymerase C2 0.01 OrthoFinder output from all 47 species
Pp3c3_35890V3.1 Pp3c3_35890 DNA-directed RNA polymerase family protein 0.01 OrthoFinder output from all 47 species
Pp3c9_12670V3.1 EMB1989, RPB2,... DNA-directed RNA polymerase family protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!