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  5. Lfl_g03524

Lfl_g03524


Description : not classified & original description: none


Gene families : OG0004684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004684_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03524

Target Alias Description ECC score Gene Family Method Actions
AT2G25730 No alias unknown protein; Has 157 Blast hits to 144 proteins in... 0.03 OrthoFinder output from all 47 species
Aev_g01617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07096 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g01996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10942 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0682.g082027 No alias not classified & original description: CDS=2223-8297 0.03 OrthoFinder output from all 47 species
Cba_g02120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z229800.1 Ceric.1Z229800 not classified & original description: pacid=50637151... 0.05 OrthoFinder output from all 47 species
Ceric.25G067100.1 Ceric.25G067100 not classified & original description: pacid=50593284... 0.04 OrthoFinder output from all 47 species
Dcu_g09637 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g37987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035749001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_14991 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g40990.2 LOC_Os01g40990 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_350854g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_99199g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g19740.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002240 No alias not classified & original description: CDS=107-7096 0.04 OrthoFinder output from all 47 species
Smo443317 No alias Disease resistance response protein 206 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
Spa_g08439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20494 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e020594_P001 Zm00001e020594 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!