Lfl_g03522


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03522

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.12 OrthoFinder output from all 47 species
Adi_g003682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g101355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g26135 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g29315 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene61689.t1 Aspi01Gene61689 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.04 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g34188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017381001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.07 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.03 OrthoFinder output from all 47 species
Msp_g31543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07995 No alias substrate adaptor of SCF E3 ubiquitin ligase *(PCH) &... 0.03 OrthoFinder output from all 47 species
Nbi_g27550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g19896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015275 No alias not classified & original description: CDS=1-5475 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026478 No alias not classified & original description: CDS=1336-7002 0.02 OrthoFinder output from all 47 species
Sam_g11582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Smo442478 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Solyc06g068230.4.1 Solyc06g068230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47021 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016102_P002 Zm00001e016102 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species
Zm00001e033372_P001 Zm00001e033372 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR028275 CLU_N 49 119
IPR033646 CLU-central 779 922
No external refs found!