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  5. Lfl_g03350

Lfl_g03350


Description : not classified & original description: none


Gene families : OG0005341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03350
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Ceric.01G083400.1 Ceric.01G083400 not classified & original description: pacid=50591559... 0.06 OrthoFinder output from all 47 species
Dcu_g14547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os10g24070.1 LOC_Os10g24070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo441046 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g090650.4.1 Solyc02g090650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 460 548
IPR024964 CTLH/CRA 48 163
No external refs found!