Ala_g33320 (AGL14)

Aliases : AGL14

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g33320
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
Aev_g20345	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene17771.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17817.t1	AGL6, Aspi01Gene17817	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g37029	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.04G082300.1	AGL28, Ceric.04G082300	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.12G052800.1	GL19, AGL19,...	MADS/AGL-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ehy_g05429	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Gb_01880	AGL6	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Gb_12778	No alias	transcription factor (MADS/AGL)	0.06	OrthoFinder output from all 47 species
LOC_Os02g49840.1	AGL16, LOC_Os02g49840	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
MA_9841429g0010	AGL9, SEP3	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Pnu_g25142	AGL10, CAL1, CAL	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g25344	AGL30	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006240	No alias	not classified & original description: CDS=1-240	0.03	OrthoFinder output from all 47 species
Solyc02g071730.4.1	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc03g006830.3.1	AGL42, Solyc03g006830	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc04g078300.3.1	AGL104, Solyc04g078300	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Zm00001e015728_P001	AGL16, Zm00001e015728	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	58	101
IPR002487	TF_Kbox	139	191

External Links

No external refs found!

Ala_g33320 (AGL14)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation