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  5. Ala_g29346

Ala_g29346 (PGY1)


Aliases : PGY1

Description : not classified & original description: none


Gene families : OG0001297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g29346
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00167280 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G08360 No alias Ribosomal protein L1p/L10e family 0.02 OrthoFinder output from all 47 species
AT5G22440 No alias Ribosomal protein L1p/L10e family 0.02 OrthoFinder output from all 47 species
Als_g44223 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g08043 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020697.31 No alias 60S ribosomal protein L10a OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cre02.g101350 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Gb_13744 No alias component RPL10a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Gb_28506 No alias component RPL10a of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os01g64090.1 LOC_Os01g64090 component RPL10a of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_71921g0010 No alias component RPL10a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Msp_g00232 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g03987 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c20_19190V3.1 Pp3c20_19190 Ribosomal protein L1p/L10e family 0.03 OrthoFinder output from all 47 species
Sam_g12736 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g26155 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo230302 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e022063_P001 Zm00001e022063 component RPL10a of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 1 96
No external refs found!