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  4. Sequence
  5. Ala_g27953

Ala_g27953


Description : not classified & original description: none


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g27953
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00176760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00166770 evm_27.TU.AmTr_v1... Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G29520 No alias AWPM-19-like family protein 0.04 OrthoFinder output from all 47 species
AT5G18970 No alias AWPM-19-like family protein 0.03 OrthoFinder output from all 47 species
AT5G46530 No alias AWPM-19-like family protein 0.03 OrthoFinder output from all 47 species
Adi_g011454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077260 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g40517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g35491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00976.t1 Aspi01Gene00976 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34673.t1 Aspi01Gene34673 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44336.t1 Aspi01Gene44336 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000342 No alias not classified & original description: CDS=215-733 0.03 OrthoFinder output from all 47 species
Ceric.37G004800.1 Ceric.37G004800 not classified & original description: pacid=50615541... 0.05 OrthoFinder output from all 47 species
Ceric.37G005000.1 Ceric.37G005000 not classified & original description: pacid=50616787... 0.07 OrthoFinder output from all 47 species
Ceric.37G005100.1 Ceric.37G005100 not classified & original description: pacid=50616791... 0.04 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.06 OrthoFinder output from all 47 species
Dac_g01968 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40048 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g45978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35411 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os01g14530.1 LOC_Os01g14530 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g50440.1 LOC_Os01g50440 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g03103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14386 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19919 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
MA_101266g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10157399g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10428014g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_199g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_812511g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Mp3g04500.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g01060.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Nbi_g02568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019776 No alias not classified & original description: CDS=123-641 0.04 OrthoFinder output from all 47 species
Sam_g00344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g080290.3.1 Solyc01g080290 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g04019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020052_P001 Zm00001e020052 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 14 139
No external refs found!