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  5. Lfl_g02780

Lfl_g02780


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00034700 evm_27.TU.AmTr_v1... Universal stress protein PHOS32 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00165p00044350 evm_27.TU.AmTr_v1... Universal stress protein PHOS32 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g01816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20927 RD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003679001 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035248001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os02g52314.1 LOC_Os02g52314 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10429928g0010 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g06589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006680.3.1 Solyc03g006680 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g054270.2.1 Solyc05g054270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31160 No alias HUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 11 161
No external refs found!