Ala_g27458

Description : not classified & original description: none

Gene families : OG0000641 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g27458
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
Aev_g35444	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g35406	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Len_g24131	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g20370	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g45931	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002372	PQQ_repeat	44	301
IPR002372	PQQ_repeat	424	500

External Links

No external refs found!