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  5. Ala_g26371

Ala_g26371


Description : not classified & original description: none


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g26371

Target Alias Description ECC score Gene Family Method Actions
AT5G09880 No alias Splicing factor, CC1-like 0.02 OrthoFinder output from all 47 species
Als_g21139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 207 265
IPR000504 RRM_dom 302 373
IPR029123 RBM39_linker 393 503
No external refs found!