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  5. Ala_g25416

Ala_g25416


Description : not classified & original description: none


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g25416

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00182670 evm_27.TU.AmTr_v1... F-box protein At1g67340 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g011762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67728.t2 Aspi01Gene67728 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g043090 No alias not classified & original description: CDS=327-2291 0.03 OrthoFinder output from all 47 species
Dcu_g05391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_219531g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g21990.1 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g07796 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g07797 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021897 No alias not classified & original description: CDS=923-2077 0.03 OrthoFinder output from all 47 species
Spa_g31042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014568_P002 Zm00001e014568 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 328 369
No external refs found!