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  5. Ala_g24409

Ala_g24409 (MCM4)


Aliases : MCM4

Description : component *(MCM4) of MCM replicative DNA helicase complex & original description: none


Gene families : OG0001056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g24409
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00128450 MCM4,... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.08 OrthoFinder output from all 47 species
AMTR_s00008p00218750 MCM9,... Cell cycle.interphase.DNA replication.initiation.MCM8-9... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00030490 MCM7, PRL,... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.05 OrthoFinder output from all 47 species
AT4G02060 MCM7, PRL Minichromosome maintenance (MCM2/3/5) family protein 0.03 OrthoFinder output from all 47 species
Adi_g007814 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Adi_g059401 MCM9 component *(MCM9) of MCM8-9 cell cycle auxiliary complex... 0.03 OrthoFinder output from all 47 species
Als_g03794 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Als_g06966 MCM4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07824 MCM4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07825 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Aop_g09863 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.12 OrthoFinder output from all 47 species
Aop_g23244 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Aspi01Gene22827.t1 MCM4, Aspi01Gene22827 component *(MCM4) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25633.t1 MCM4, Aspi01Gene25633 component *(MCM4) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Aspi01Gene25932.t1 MCM7, PRL,... component *(MCM7) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Azfi_s0544.g076399 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Cba_g13812 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
Ceric.04G002100.1 MCM7, PRL,... component *(MCM7) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Ceric.10G009500.1 MCM4, Ceric.10G009500 component *(MCM4) of MCM replicative DNA helicase... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.164 MCM4 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.38 MCM7, PRL Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.01 OrthoFinder output from all 47 species
Cre07.g316850 MCM4 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.07 OrthoFinder output from all 47 species
Cre10.g455850 MCM7, PRL Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.08 OrthoFinder output from all 47 species
Dac_g06469 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Dac_g14939 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Dac_g15991 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Dcu_g05722 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.12 OrthoFinder output from all 47 species
Dcu_g40402 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
GSVIVT01024207001 MCM4 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.04 OrthoFinder output from all 47 species
GSVIVT01028118001 MCM7, PRL Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.09 OrthoFinder output from all 47 species
Gb_09191 MCM4 component MCM4 of MCM replicative DNA helicase complex 0.05 OrthoFinder output from all 47 species
Gb_35205 MCM7, PRL component MCM7 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
Gb_36024 MCM4 component MCM4 of MCM replicative DNA helicase complex 0.06 OrthoFinder output from all 47 species
LOC_Os01g36390.1 MCM4, LOC_Os01g36390 component MCM4 of MCM replicative DNA helicase complex 0.07 OrthoFinder output from all 47 species
LOC_Os12g37400.1 MCM7, PRL, LOC_Os12g37400 component MCM7 of MCM replicative DNA helicase complex 0.06 OrthoFinder output from all 47 species
Len_g00736 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Len_g11914 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
Len_g14366 MCM9 component *(MCM9) of MCM8-9 cell cycle auxiliary complex... 0.02 OrthoFinder output from all 47 species
Lfl_g19272 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Lfl_g39364 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
MA_10426237g0010 MCM7, PRL component MCM7 of MCM replicative DNA helicase complex 0.09 OrthoFinder output from all 47 species
MA_10434231g0010 MCM4 DNA replication licensing factor MCM4 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species
Mp2g02600.1 MCM7, PRL component MCM7 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
Mp3g02380.1 MCM4 component MCM4 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
Mp4g02430.1 MCM9 component MCM9 of MCM8-9 cell cycle auxiliary complex 0.07 OrthoFinder output from all 47 species
Msp_g06139 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Msp_g09222 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Nbi_g03098 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Nbi_g04377 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Ore_g27144 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
Ppi_g01337 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Ppi_g25980 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0298.g027193 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.06 OrthoFinder output from all 47 species
Sam_g06717 No alias component *(MCM4) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Sam_g09734 No alias component *(MCM7) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Sam_g27151 No alias component *(MCM7) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Solyc01g079500.4.1 MCM7, PRL, Solyc01g079500 component MCM7 of MCM replicative DNA helicase complex 0.06 OrthoFinder output from all 47 species
Solyc01g110130.3.1 MCM4, Solyc01g110130 component MCM4 of MCM replicative DNA helicase complex 0.09 OrthoFinder output from all 47 species
Spa_g10751 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Spa_g11927 MCM7, PRL not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g11928 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Spa_g44409 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Tin_g06082 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Tin_g12164 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Zm00001e002873_P001 MCM7, PRL, Zm00001e002873 component MCM7 of MCM replicative DNA helicase complex 0.08 OrthoFinder output from all 47 species
Zm00001e018214_P001 MCM7, PRL, Zm00001e018214 component MCM7 of MCM replicative DNA helicase complex 0.07 OrthoFinder output from all 47 species
Zm00001e026379_P001 MCM4, Zm00001e026379 component MCM4 of MCM replicative DNA helicase complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0032508 DNA duplex unwinding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR033762 MCM_OB 238 367
IPR027925 MCM_N 142 231
IPR001208 MCM_dom 431 653
IPR041562 MCM_lid 669 755
No external refs found!