Ala_g24240 (ATROPGEF1, ROPGEF1)

Aliases : ATROPGEF1, ROPGEF1

Description : RopGEF guanine nucleotide exchange factor *(PRONE) & original description: none

Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g24240
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00064220	ROPGEF8,...	Multi-process regulation.Rop GTPase regulatory...	0.02	OrthoFinder output from all 47 species
AT4G38430	ATROPGEF1, ROPGEF1	rho guanyl-nucleotide exchange factor 1	0.03	OrthoFinder output from all 47 species
AT5G02010	ROPGEF7, ATROPGEF7	RHO guanyl-nucleotide exchange factor 7	0.04	OrthoFinder output from all 47 species
Adi_g024149	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.05	OrthoFinder output from all 47 species
Adi_g075365	ROPGEF7, ATROPGEF7	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g117760	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Aop_g08558	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Aop_g70258	ROPGEF8, ATROPGEF8	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene02176.t1	ATROPGEF5,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.05	OrthoFinder output from all 47 species
Aspi01Gene47160.t1	ATROPGEF1,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene54790.t1	ATROPGEF1,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0084.g038941	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0580.g078306	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Cba_g71087	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.06	OrthoFinder output from all 47 species
Ceric.04G001800.1	ROPGEF8,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Ceric.08G039100.1	ROPGEF7,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Dac_g00928	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Dac_g07468	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Dde_g18145	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
GSVIVT01034063001	ROPGEF7, ATROPGEF7	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
GSVIVT01036908001	ROPGEF14, ATROPGEF14	Multi-process regulation.Rop GTPase regulatory...	0.04	OrthoFinder output from all 47 species
LOC_Os04g47170.1	ROPGEF3,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
LOC_Os09g37270.1	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
LOC_Os10g40270.1	ROPGEF3,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
Lfl_g06173	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Msp_g08115	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Nbi_g08604	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Nbi_g15696	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Pir_g35651	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026117	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Sam_g11202	No alias	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Sam_g15875	No alias	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Sam_g40346	No alias	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Smo43109	ROPGEF7, ATROPGEF7	Multi-process regulation.Rop GTPase regulatory...	0.02	OrthoFinder output from all 47 species
Smo62955	ROPGEF7, ATROPGEF7	Multi-process regulation.Rop GTPase regulatory...	0.02	OrthoFinder output from all 47 species
Solyc04g082110.4.1	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Tin_g05160	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Zm00001e010284_P002	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Zm00001e020182_P002	ATROPGEF9,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Zm00001e026517_P004	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Zm00001e034952_P003	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
Zm00001e034978_P001	ROPGEF3,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEA	Interproscan
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005512	PRONE_dom	156	521

External Links

No external refs found!

Ala_g24240 (ATROPGEF1, ROPGEF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation