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  5. Ala_g23351

Ala_g23351 (EHD1, ATEHD1)


Aliases : EHD1, ATEHD1

Description : regulatory protein *(EHD) involved in endocytic recycling & original description: none


Gene families : OG0001327 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type DescriptionActions
Neighborhood HRR: Ala_g23351

Target Alias Description ECC score Gene Family Method Actions
AT4G05520 ATEHD2, EHD2 EPS15 homology domain 2 0.1 OrthoFinder output from all 47 species
Aev_g17002 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.09 OrthoFinder output from all 47 species
Als_g13548 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.13 OrthoFinder output from all 47 species
Aop_g19998 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.22 OrthoFinder output from all 47 species
Aop_g68837 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.15 OrthoFinder output from all 47 species
Aspi01Gene14908.t1 EHD1, ATEHD1,... regulatory protein *(EHD) involved in endocytic... 0.13 OrthoFinder output from all 47 species
Ceric.12G036700.1 EHD1, ATEHD1,... regulatory protein *(EHD) involved in endocytic... 0.13 OrthoFinder output from all 47 species
Dac_g16241 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.13 OrthoFinder output from all 47 species
Dcu_g41979 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.09 OrthoFinder output from all 47 species
Dcu_g45463 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01007243001 EHD1, ATEHD1 EH domain-containing protein 1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_12846 EHD1, ATEHD1 EH domain-containing protein 1 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Len_g12677 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.08 OrthoFinder output from all 47 species
Lfl_g39066 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.13 OrthoFinder output from all 47 species
MA_110869g0010 EHD1, ATEHD1 EH domain-containing protein 1 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_72515g0010 EHD1, ATEHD1 EH domain-containing protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_864007g0010 ATEHD2, EHD2 EH domain-containing protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g06402 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.15 OrthoFinder output from all 47 species
Nbi_g04765 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.18 OrthoFinder output from all 47 species
Nbi_g14019 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.13 OrthoFinder output from all 47 species
Ore_g45388 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.07 OrthoFinder output from all 47 species
Ppi_g04495 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.11 OrthoFinder output from all 47 species
Ppi_g18211 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.11 OrthoFinder output from all 47 species
Sam_g35254 No alias regulatory protein *(EHD) involved in endocytic... 0.13 OrthoFinder output from all 47 species
Smo414547 EHD1, ATEHD1 EH domain-containing protein 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Spa_g37314 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.12 OrthoFinder output from all 47 species
Spa_g46622 ATEHD2, EHD2 regulatory protein *(EHD) involved in endocytic... 0.02 OrthoFinder output from all 47 species
Spa_g50167 EHD1, ATEHD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04590 EHD1, ATEHD1 regulatory protein *(EHD) involved in endocytic... 0.04 OrthoFinder output from all 47 species
Zm00001e025197_P001 EHD1, ATEHD1,... EH domain-containing protein 1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR045063 Dynamin_N 198 357
IPR031692 EHD_N 161 193
IPR040990 DUF5600 433 535
IPR000261 EH_dom 18 81
No external refs found!