Ala_g23029


Description : not classified & original description: none


Gene families : OG0006516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006516_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g23029

Target Alias Description ECC score Gene Family Method Actions
Cre50.g761397 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g21180.1 LOC_Os01g21180 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g40699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c25_690V3.1 Pp3c25_690 pseudouridine synthase and archaeosine transglycosylase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR041366 Pre-PUA 22 103
IPR002478 PUA 109 185
No external refs found!