Lfl_g02225


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02225

Target Alias Description ECC score Gene Family Method Actions
Ala_g06674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36240.t1 Aspi01Gene36240 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g65712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G003300.1 Ceric.08G003300 not classified & original description: pacid=50638706... 0.04 OrthoFinder output from all 47 species
Ceric.09G067900.1 Ceric.09G067900 not classified & original description: pacid=50588290... 0.03 OrthoFinder output from all 47 species
Dac_g08942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027183 No alias not classified & original description: CDS=1-1983 0.03 OrthoFinder output from all 47 species
Spa_g07310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 171 200
IPR002885 Pentatricopeptide_repeat 237 284
IPR002885 Pentatricopeptide_repeat 303 345
IPR033443 PPR_long 389 520
No external refs found!