Description : component *(uS17) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001674 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001674_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G23740 | RPS11-BETA | ribosomal protein S11-beta | 0.03 | OrthoFinder output from all 47 species | |
Adi_g021180 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G042300.1 | Ceric.02G042300 | component *(uS17) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000551.22 | EMB1080 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g01981 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g52361.1 | EMB1080, LOC_Os04g52361 | component RPS11 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g10608.1 | RPS11-BETA,... | component RPS11 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Mp4g23360.1 | EMB1080 | component RPS11 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Mp6g10500.1 | EMB1080 | component RPS11 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Msp_g27112 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g11218 | EMB1080 | component *(uS17) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0073.g017004 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g04222 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g073790.3.1 | Solyc06g073790 | component RPS11 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Spa_g31268 | No alias | component *(uS17) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | HCCA |
MF | GO:0004620 | phospholipase activity | IEP | HCCA |
MF | GO:0004629 | phospholipase C activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0016298 | lipase activity | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
MF | GO:0070569 | uridylyltransferase activity | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |