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  5. Ala_g22100

Ala_g22100 (SFR6)


Aliases : SFR6

Description : component *(MED16) of tail module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0004636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g22100
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Aev_g01581 SFR6 component *(MED16) of tail module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Aop_g63638 SFR6 component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ceric.22G016300.1 SFR6, Ceric.22G016300 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ceric.22G020500.1 SFR6, Ceric.22G020500 component *(MED16) of tail module of MEDIATOR... 0.06 OrthoFinder output from all 47 species
Cre04.g220600 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g07130 SFR6 component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
LOC_Os10g35560.1 SFR6, LOC_Os10g35560 component MED16 of tail module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Len_g21218 SFR6 component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
MA_176669g0010 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.07 OrthoFinder output from all 47 species
Msp_g24817 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ore_g19699 SFR6 component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ppi_g02397 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Sam_g29952 No alias component *(MED16) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Solyc02g078520.4.1 SFR6, Solyc02g078520 component MED16 of tail module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Spa_g08446 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Tin_g02895 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!