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  5. Lfl_g02207

Lfl_g02207


Description : subunit gamma of cargo adaptor F-subcomplex & original description: none


Gene families : OG0004080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02207
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00069290 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
AT4G34450 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.08 OrthoFinder output from all 47 species
Aev_g14556 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Aev_g44391 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ala_g05681 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Als_g23314 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Aob_g15373 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aop_g06505 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G110200.1 Ceric.04G110200 subunit gamma of cargo adaptor F-subcomplex & original... 0.11 OrthoFinder output from all 47 species
Ceric.28G060100.1 Ceric.28G060100 subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Cre06.g310750 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Dcu_g01867 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Dde_g05374 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 OrthoFinder output from all 47 species
Gb_36850 No alias subunit gamma of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Gb_36851 No alias Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os03g12590.1 LOC_Os03g12590 subunit gamma of cargo adaptor F-subcomplex 0.1 OrthoFinder output from all 47 species
LOC_Os07g10150.1 LOC_Os07g10150 subunit gamma of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
Len_g13320 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Msp_g24101 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g10516 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Ore_g06577 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Pir_g10430 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g01355 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011888 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Smo268757 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Solyc01g109540.4.1 Solyc01g109540 subunit gamma of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
Spa_g17860 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Tin_g11774 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000949_P001 Zm00001e000949 subunit gamma of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
Zm00001e011398_P002 Zm00001e011398 subunit gamma of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
Zm00001e033065_P001 Zm00001e033065 subunit gamma of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR013040 Coatomer_gsu_app_Ig-like_dom 632 776
IPR032154 Coatomer_g_Cpla 778 892
IPR002553 Clathrin/coatomer_adapt-like_N 31 542
No external refs found!