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  5. Ala_g21604

Ala_g21604


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g21604
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00035310 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.11 OrthoFinder output from all 47 species
Adi_g011982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0185.g056668 No alias not classified & original description: CDS=100-1869 0.04 OrthoFinder output from all 47 species
Ceric.09G071300.1 Ceric.09G071300 not classified & original description: pacid=50588528... 0.1 OrthoFinder output from all 47 species
Ceric.09G071400.1 Ceric.09G071400 not classified & original description: pacid=50587640... 0.05 OrthoFinder output from all 47 species
Ceric.21G079300.1 Ceric.21G079300 not classified & original description: pacid=50602615... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001343.3 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01013268001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Gb_35998 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g27110.1 LOC_Os02g27110 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10343795g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_74056g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g24541 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005700 No alias not classified & original description: CDS=17-12964 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018244 No alias not classified & original description: CDS=306-11297 0.04 OrthoFinder output from all 47 species
Sam_g17487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440026 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo444980 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Spa_g17786 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e024722_P001 Zm00001e024722 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024724_P001 Zm00001e024724 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009291 Vps62 2034 2161
IPR009291 Vps62 4278 4396
IPR009291 Vps62 2260 2406
IPR031642 VPS13_mid_RBG 568 793
IPR010482 Peroxin 2941 3053
IPR031646 VPS13_extend_chorein 135 381
IPR026854 VPS13-like_N 2 109
IPR009543 VPS13_VAB 3383 3575
No external refs found!