Ala_g21263

Description : not classified & original description: none

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g21263
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00146080	RPS2,...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT3G15700	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Ceric.01G123500.1	RPS5, Ceric.01G123500	not classified & original description: pacid=50592013...	0.03	OrthoFinder output from all 47 species
GSVIVT01015167001	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_12859	No alias	Probable disease resistance protein At4g27220...	0.04	OrthoFinder output from all 47 species
MA_10244735g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10436071g0010	No alias	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
MA_31174g0010	No alias	Probable disease resistance protein At1g61190...	0.04	OrthoFinder output from all 47 species
MA_77943g0010	No alias	Putative disease resistance protein At4g10780...	0.03	OrthoFinder output from all 47 species
MA_7926693g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_91246g0010	No alias	Probable disease resistance protein At1g61190...	0.03	OrthoFinder output from all 47 species
Solyc10g076440.1.1	Solyc10g076440	Disease resistance protein At4g27190 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	249	473

External Links

No external refs found!