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  5. Ala_g21002

Ala_g21002


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g21002
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g035059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30372 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.04 OrthoFinder output from all 47 species
Ceric.26G072500.1 Ceric.26G072500 not classified & original description: pacid=50600348... 0.03 OrthoFinder output from all 47 species
Dac_g23136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Lfl_g38813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 775 913
IPR028275 CLU_N 48 118
No external refs found!