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  5. Lfl_g01988

Lfl_g01988 (SAY1)


Aliases : SAY1

Description : cargo receptor protein *(PUX7/8/9/13) & original description: none


Gene families : OG0002894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01988

Target Alias Description ECC score Gene Family Method Actions
Aev_g06080 SAY1 cargo receptor protein *(PUX7/8/9/13) & original... 0.05 OrthoFinder output from all 47 species
Als_g14550 SAY1 cargo receptor protein *(PUX7/8/9/13) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0075.g037627 SAY1 cargo receptor protein *(PUX7/8/9/13) & original... 0.02 OrthoFinder output from all 47 species
Cba_g12317 SAY1 cargo receptor protein *(PUX7/8/9/13) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14115 SAY1 cargo receptor protein *(PUX7/8/9/13) & original... 0.03 OrthoFinder output from all 47 species
Ore_g07140 SAY1 cargo receptor protein *(PUX7/8/9/13) & original... 0.05 OrthoFinder output from all 47 species
Solyc08g080410.3.1 SAY1, Solyc08g080410 adaptor protein (PUX7/8/9/13) 0.03 OrthoFinder output from all 47 species
Spa_g08663 SAY1 cargo receptor protein *(PUX7/8/9/13) & original... 0.02 OrthoFinder output from all 47 species
Tin_g14760 SAY1 cargo receptor protein *(PUX7/8/9/13) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001012 UBX_dom 581 660
No external refs found!