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  5. Ala_g19636

Ala_g19636 (ATSSL4, SSL4)


Aliases : ATSSL4, SSL4

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0001226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g19636

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00067420 evm_27.TU.AmTr_v1... Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 0.03 OrthoFinder output from all 47 species
AMTR_s00147p00094600 ATSSL4, SSL4,... Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 0.02 OrthoFinder output from all 47 species
AT3G51420 ATSSL4, SSL4 strictosidine synthase-like 4 0.04 OrthoFinder output from all 47 species
GSVIVT01003826001 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04241 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g50284 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
MA_908014g0010 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g08926 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010759_P002 LAP3, Zm00001e010759 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 159 247
No external refs found!