- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g19204 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00080p00053460 | evm_27.TU.AmTr_v1... | Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G22330 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G33470 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g25590 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13416 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g33564 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08965 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g10873 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00857 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30439 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39269 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g51890.1 | LOC_Os02g51890 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g17760.1 | LOC_Os03g17760 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g15889 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_3307g0020 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Mp8g04430.1 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25604 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003275 | No alias | not classified & original description: CDS=1-1056 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g36028 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g049920.4.1 | Solyc04g049920 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc04g074310.4.1 | Solyc04g074310 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g044470.3.1 | Solyc11g044470 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001294_P001 | Zm00001e001294 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030837_P006 | Zm00001e030837 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |