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  5. Ala_g18568

Ala_g18568 (ATCBP80, ABH1, ENS, CBP80)


Aliases : ATCBP80, ABH1, ENS, CBP80

Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex & original description: none


Gene families : OG0004633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g18568
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00245860 ATCBP80, ABH1,... RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 OrthoFinder output from all 47 species
Aop_g05374 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Ceric.38G051300.1 ATCBP80, ABH1,... component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021589.24 ATCBP80, ABH1, ENS, CBP80 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.01 OrthoFinder output from all 47 species
Cre12.g524100 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.01 OrthoFinder output from all 47 species
Dac_g23459 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.04 OrthoFinder output from all 47 species
Dcu_g08222 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
LOC_Os03g22570.1 ATCBP80, ABH1,... component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.05 OrthoFinder output from all 47 species
Len_g07985 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.04 OrthoFinder output from all 47 species
Lfl_g02038 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.04 OrthoFinder output from all 47 species
Sam_g12525 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Sam_g28009 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.04 OrthoFinder output from all 47 species
Smo115849 ATCBP80, ABH1, ENS, CBP80 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.03 OrthoFinder output from all 47 species
Solyc10g005530.3.1 ATCBP80, ABH1,... component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.04 OrthoFinder output from all 47 species
Tin_g01260 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.02 OrthoFinder output from all 47 species
Zm00001e001643_P004 ATCBP80, ABH1,... component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR015172 MIF4G-like_typ-1 336 463
IPR015174 MIF4G-like_typ-2 497 807
IPR003890 MIF4G-like_typ-3 35 200
No external refs found!