1. Home
  2. Species
  3. Adiantum latifolium
  4. Sequence
  5. Ala_g18476

Ala_g18476 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g18476

Target Alias Description ECC score Gene Family Method Actions
Aob_g18418 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23705.t1 APUM12, PUM12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.02 OrthoFinder output from all 47 species
GSVIVT01009386001 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033396001 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038732001 APUM8, PUM8 Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ppi_g17261 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 791 825
IPR001313 Pumilio_RNA-bd_rpt 608 639
IPR001313 Pumilio_RNA-bd_rpt 572 606
IPR001313 Pumilio_RNA-bd_rpt 646 676
IPR001313 Pumilio_RNA-bd_rpt 684 714
IPR001313 Pumilio_RNA-bd_rpt 757 774
IPR001313 Pumilio_RNA-bd_rpt 719 752
No external refs found!