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  5. Lfl_g01792

Lfl_g01792


Description : not classified & original description: none


Gene families : OG0002460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002460_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01792

Target Alias Description ECC score Gene Family Method Actions
Adi_g019301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20674 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19854 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g07309 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g11887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g56897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021309 No alias not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Spa_g57229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07883 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!