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  5. Ala_g16611

Ala_g16611


Description : subunit eta *(CCT7) of CCT chaperonin folding complex & original description: none


Gene families : OG0006075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g16611
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT3G11830 No alias TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Aop_g01325 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Ceric.05G016500.1 Ceric.05G016500 subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001371.8 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Cre01.g026550 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Dac_g09536 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g14177 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Lfl_g17138 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
MA_20110g0010 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Mp7g09680.1 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Pp3c15_8230V3.1 Pp3c15_8230 TCP-1/cpn60 chaperonin family protein 0.01 OrthoFinder output from all 47 species
Sam_g18786 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Sam_g27520 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Smo168086 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Solyc06g065520.3.1 Solyc06g065520 CCT7 subunit eta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Zm00001e025196_P001 Zm00001e025196 CCT7 subunit eta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 36 527
No external refs found!