Aliases : ATG8F
Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none
Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ala_g16349 | |
Cluster | HCCA: Cluster_136 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G62040 | ATG8C | Ubiquitin-like superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
AT2G45170 | ATG8E, ATATG8E | AUTOPHAGY 8E | 0.04 | OrthoFinder output from all 47 species | |
Adi_g085508 | ATG8F | autophagosome ubiquitin-fold protein *(ATG8) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.27G065300.1 | ATG8F, Ceric.27G065300 | autophagosome ubiquitin-fold protein *(ATG8) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cre16.g689650 | ATG8F | Vesicle trafficking.autophagosome formation.ATG8/ATG12... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g05465 | ATG8F | autophagosome ubiquitin-fold protein *(ATG8) & original... | 0.02 | OrthoFinder output from all 47 species | |
Smo109593 | ATG8F | Vesicle trafficking.autophagosome formation.ATG8/ATG12... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006887_P001 | ATG8C, Zm00001e006887 | ATG8 autophagosome ubiquitin-fold protein | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e010463_P001 | ATG8C, Zm00001e010463 | ATG8 autophagosome ubiquitin-fold protein | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e039966_P001 | ATG8C, Zm00001e039966 | ATG8 autophagosome ubiquitin-fold protein | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
BP | GO:0010038 | response to metal ion | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004241 | Atg8-like | 59 | 162 |
No external refs found! |