Ala_g15632


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g15632

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g056275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088267 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g05828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07187 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g07789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20579 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26639 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g33378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06166 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06353 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18203 OTP82 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30586 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30688 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g010264 No alias not classified & original description: CDS=1-2337 0.05 OrthoFinder output from all 47 species
Azfi_s0063.g035389 No alias not classified & original description: CDS=1-2073 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.05 OrthoFinder output from all 47 species
Azfi_s0242.g059819 No alias not classified & original description: CDS=1-2853 0.1 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.06 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.07 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.05 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.06 OrthoFinder output from all 47 species
Azfi_s0551.g076611 No alias not classified & original description: CDS=1-2037 0.04 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.06 OrthoFinder output from all 47 species
Azfi_s2487.g111794 No alias not classified & original description: CDS=200-2266 0.04 OrthoFinder output from all 47 species
Cba_g04732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20854 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29369 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g66799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G005800.1 CRR22, Ceric.09G005800 not classified & original description: pacid=50588191... 0.06 OrthoFinder output from all 47 species
Ceric.10G031100.1 Ceric.10G031100 not classified & original description: pacid=50612341... 0.05 OrthoFinder output from all 47 species
Ceric.15G051000.1 Ceric.15G051000 not classified & original description: pacid=50640878... 0.05 OrthoFinder output from all 47 species
Ceric.1Z025200.1 Ceric.1Z025200 not classified & original description: pacid=50576842... 0.04 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.05 OrthoFinder output from all 47 species
Ceric.26G030400.1 Ceric.26G030400 not classified & original description: pacid=50599909... 0.05 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.05 OrthoFinder output from all 47 species
Dac_g09663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g12578 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29239 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06184 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32917 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01227 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04423 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25475 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g30080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16863 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18166 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02232 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03887 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g17674 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g18894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005758 No alias not classified & original description: CDS=1-2499 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005759 No alias not classified & original description: CDS=1-3063 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009977 No alias not classified & original description: CDS=1-2472 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013724 No alias not classified & original description: CDS=1-1671 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025256 No alias not classified & original description: CDS=1-3936 0.03 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17490 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25854 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56966 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g10096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17462 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29152 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g40520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 656 678
IPR002885 Pentatricopeptide_repeat 178 208
IPR002885 Pentatricopeptide_repeat 252 275
IPR002885 Pentatricopeptide_repeat 486 509
IPR002885 Pentatricopeptide_repeat 615 644
IPR002885 Pentatricopeptide_repeat 514 542
IPR002885 Pentatricopeptide_repeat 368 387
IPR002885 Pentatricopeptide_repeat 395 442
IPR002885 Pentatricopeptide_repeat 277 323
No external refs found!