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  5. Lfl_g01559

Lfl_g01559 (GTE6)


Aliases : GTE6

Description : transcriptional co-activator *(BET/GTE) & original description: none


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01559

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.03 OrthoFinder output from all 47 species
AT3G27260 GTE8 global transcription factor group E8 0.04 OrthoFinder output from all 47 species
Adi_g020157 GTE1, GTE01, IMB1 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Adi_g086860 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Adi_g087256 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Adi_g094613 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Adi_g112451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114774 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.06 OrthoFinder output from all 47 species
Ala_g06361 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Als_g12929 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Als_g15387 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Als_g15396 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010983 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Cba_g05911 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Cba_g12426 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Cba_g72722 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G008400.1 GTE2, Ceric.06G008400 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G056100.1 GTE6, Ceric.31G056100 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Cre08.g367300 BET9, ATBET9 Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g09842 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Dac_g39187 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08190 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Dde_g22842 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01038522001 GTE7 Transcription factor GTE7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_04671 NPX1 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
LOC_Os04g53170.1 GTE7, LOC_Os04g53170 transcriptional co-activator (BET/GTE) 0.01 OrthoFinder output from all 47 species
MA_10435152g0020 GTE8 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
MA_18020g0010 GTE4 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Ore_g29656 GTE8 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Pir_g00429 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Pir_g04263 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Pir_g04886 GTE1, GTE01, IMB1 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13104 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g29804 BET9, ATBET9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00834 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g07562 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g11422 GTE6 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g38970 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002096 GTE8 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022457 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Sam_g12553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13117 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Sam_g28425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51522 No alias transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g091660.3.1 GTE7, Solyc02g091660 transcriptional co-activator (BET/GTE) 0.01 OrthoFinder output from all 47 species
Solyc07g062660.4.1 GTE4, Solyc07g062660 transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species
Spa_g20624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22072 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Spa_g30002 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Tin_g03373 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Tin_g14171 GTE1, GTE01, IMB1 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Tin_g31516 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006897_P002 GTE7, Zm00001e006897 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Zm00001e014297_P001 GTE4, Zm00001e014297 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Zm00001e016462_P001 GTE4, Zm00001e016462 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Zm00001e024861_P001 GTE4, Zm00001e024861 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Zm00001e026041_P001 GTE4, Zm00001e026041 transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 228 314
IPR027353 NET_dom 394 454
No external refs found!