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  5. Ala_g15204

Ala_g15204 (YCF32, PSBY)


Aliases : YCF32, PSBY

Description : component *(PsbY) of PS-II complex & original description: none


Gene families : OG0003004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g15204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00157390 YCF32, PSBY,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.11 OrthoFinder output from all 47 species
AT1G67740 YCF32, PSBY photosystem II BY 0.11 OrthoFinder output from all 47 species
Adi_g054387 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Aev_g04515 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g20925 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Als_g00686 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g09607 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g17372 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g27429 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07588.t1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63678.t1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Azfi_s0120.g046761 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G057000.1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original... 0.05 OrthoFinder output from all 47 species
Cre10.g452100 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.08 OrthoFinder output from all 47 species
Dac_g05677 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11818 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02448 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03541 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51618 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g25972 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00811 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Gb_22296 YCF32, PSBY component PsbY of PS-II complex 0.08 OrthoFinder output from all 47 species
LOC_Os08g02630.1 YCF32, PSBY,... component PsbY of PS-II complex 0.1 OrthoFinder output from all 47 species
Len_g16274 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Len_g41372 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
MA_12201g0010 YCF32, PSBY component PsbY of PS-II complex 0.11 OrthoFinder output from all 47 species
Mp8g12730.1 YCF32, PSBY component PsbY of PS-II complex 0.12 OrthoFinder output from all 47 species
Msp_g12997 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g00552 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27683 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g00365 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g37858 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c8_24120V3.1 YCF32, PSBY, Pp3c8_24120 photosystem II BY 0.02 OrthoFinder output from all 47 species
Ppi_g00114 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g38878 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018725 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021073 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Sam_g28840 No alias component *(PsbY) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Smo441673 YCF32, PSBY Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
Solyc10g077120.3.1 YCF32, PSBY,... no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g11762 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16230 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29877 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g08479 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029235_P001 YCF32, PSBY,... component PsbY of PS-II complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 156 188
IPR009388 PSII_PsbY 304 336
IPR009388 PSII_PsbY 87 119
IPR009388 PSII_PsbY 232 264
No external refs found!