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  5. Ala_g14300

Ala_g14300


Description : not classified & original description: none


Gene families : OG0011811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011811_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g14300

Target Alias Description ECC score Gene Family Method Actions
Aop_g11025 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g24211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G025400.1 OTP84, Ceric.10G025400 not classified & original description: pacid=50611872... 0.04 OrthoFinder output from all 47 species
Dac_g17094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 335 381
IPR002885 Pentatricopeptide_repeat 502 549
IPR002885 Pentatricopeptide_repeat 806 853
IPR002885 Pentatricopeptide_repeat 702 738
IPR002885 Pentatricopeptide_repeat 233 281
IPR002885 Pentatricopeptide_repeat 881 903
IPR002885 Pentatricopeptide_repeat 411 437
IPR002885 Pentatricopeptide_repeat 606 633
IPR002885 Pentatricopeptide_repeat 136 162
No external refs found!