1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g01389

Lfl_g01389 (ATCM1, CM1)


Aliases : ATCM1, CM1

Description : EC_5.4 intramolecular transferase & original description: none


Gene families : OG0003718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003718_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01389
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00113540 ATCM1, CM1,... Amino acid metabolism.biosynthesis.shikimate... 0.03 OrthoFinder output from all 47 species
Als_g17267 cm-3, CM3 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24891 cm-3, CM3 EC_5.4 intramolecular transferase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011478001 ATCM1, CM1 Amino acid metabolism.biosynthesis.shikimate... 0.04 OrthoFinder output from all 47 species
Mp2g01030.1 ATCM1, CM1 chorismate mutase 0.02 OrthoFinder output from all 47 species
Nbi_g02060 cm-3, CM3 EC_5.4 intramolecular transferase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013834_P001 ATCM2, CM2,... chorismate mutase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!