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  5. Lfl_g01336

Lfl_g01336 (EMB212, NF-YB9, LEC1, EMB 212)


Aliases : EMB212, NF-YB9, LEC1, EMB 212

Description : transcription factor *(LEC) involved in seed maturation & original description: none


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01336

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00202310 NF-YB5,... RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
Ala_g07602 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Aop_g04354 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene16041.t1 NF-YB6, L1L,... transcription factor *(LEC) involved in seed maturation... 0.05 OrthoFinder output from all 47 species
Aspi01Gene69986.t1 NF-YB3, Aspi01Gene69986 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Azfi_s1600.g104553 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.03 OrthoFinder output from all 47 species
Cba_g09692 NF-YB6, L1L transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
GSVIVT01014673001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
Len_g20303 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Ore_g28570 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pir_g46232 NF-YB5 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Ppi_g04264 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014195 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Solyc04g015060.3.1 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Solyc06g009010.1.1 NF-YB5, Solyc06g009010 component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e015700_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 41 104
No external refs found!