Ala_g13255

Description : component *(uS17c) of small plastid ribosomal-subunit proteome & original description: none

Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g13255

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00201470	RPS17, CS17,...	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
AT1G79850	RPS17, CS17, PRPS17	ribosomal protein S17	0.09	OrthoFinder output from all 47 species
Adi_g012725	No alias	component *(uS17c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Als_g47206	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Aop_g43549	No alias	component *(uS17c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Azfi_s0430.g069336	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.11G069100.1	Ceric.11G069100	component *(uS17c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Cre02.g118950	emb1129	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Dac_g17145	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Dde_g25473	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ehy_g07306	No alias	component *(uS17c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Gb_07769	RPS17, CS17, PRPS17	component psRPS17 of small ribosomal subunit proteome	0.12	OrthoFinder output from all 47 species
Lfl_g10801	No alias	component *(uS17c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
MA_10123473g0010	RPS17, CS17, PRPS17	component psRPS17 of small ribosomal subunit proteome	0.07	OrthoFinder output from all 47 species
Mp5g05080.1	RPS17, CS17, PRPS17	component psRPS17 of small ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Msp_g12962	No alias	component *(uS17c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Nbi_g24135	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Nbi_g38729	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ore_g06145	No alias	component *(uS17c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Pp3c11_14630V3.1	RPS17, CS17,...	ribosomal protein S17	0.06	OrthoFinder output from all 47 species
Pp3c1_12860V3.1	RPS17, CS17,...	ribosomal protein S17	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019876	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Sam_g47246	No alias	component *(uS17c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Solyc03g120630.4.1	RPS17, CS17,...	component psRPS17 of small ribosomal subunit proteome	0.09	OrthoFinder output from all 47 species
Spa_g48114	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Tin_g09281	RPS17, CS17, PRPS17	component *(uS17c) of small plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Zm00001e028738_P001	RPS17, CS17,...	component psRPS17 of small ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000266	Ribosomal_S17/S11	67	133

External Links

No external refs found!

Ala_g13255

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation