Ala_g12960 (AT-RSH2, ATRSH2, RSH2)

Aliases : AT-RSH2, ATRSH2, RSH2

Description : bifunctional ppGpp synthetase and hydrolase *(RSH) & original description: none

Gene families : OG0001778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001778_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g12960

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00240620	AT-RSH2, ATRSH2,...	Probable GTP diphosphokinase RSH2, chloroplastic...	0.02	OrthoFinder output from all 47 species
AT1G54130	RSH3, AT-RSH3, ATRSH3	RELA/SPOT homolog 3	0.03	OrthoFinder output from all 47 species
AT3G14050	AT-RSH2, ATRSH2, RSH2	RELA/SPOT homolog 2	0.04	OrthoFinder output from all 47 species
Aob_g03510	RSH3, AT-RSH3, ATRSH3	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.02	OrthoFinder output from all 47 species
Aob_g14692	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.03	OrthoFinder output from all 47 species
Ceric.12G079500.1	AT-RSH2, ATRSH2,...	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.02	OrthoFinder output from all 47 species
Ehy_g06085	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.02	OrthoFinder output from all 47 species
Len_g13746	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.06	OrthoFinder output from all 47 species
Lfl_g03393	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.03	OrthoFinder output from all 47 species
Lfl_g28873	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.04	OrthoFinder output from all 47 species
Mp6g06980.1	AT-RSH2, ATRSH2, RSH2	Probable GTP diphosphokinase RSH2, chloroplastic...	0.02	OrthoFinder output from all 47 species
Msp_g15249	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.03	OrthoFinder output from all 47 species
Ore_g10249	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.04	OrthoFinder output from all 47 species
Solyc03g123370.3.1	AT-RSH2, ATRSH2,...	Probable GTP diphosphokinase RSH3, chloroplastic...	0.02	OrthoFinder output from all 47 species
Tin_g46007	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.03	OrthoFinder output from all 47 species
Zm00001e034279_P001	RSH3, AT-RSH3,...	Probable GTP diphosphokinase RSH3, chloroplastic...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007685	RelA_SpoT	461	571

External Links

No external refs found!

Ala_g12960 (AT-RSH2, ATRSH2, RSH2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation