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  5. Ala_g12873

Ala_g12873


Description : not classified & original description: none


Gene families : OG0001920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12873

Target Alias Description ECC score Gene Family Method Actions
Ehy_g06995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018505001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g02371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g008930.4.1 Solyc09g008930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g11435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04060 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e019297_P001 Zm00001e019297 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045927 positive regulation of growth IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR021864 DUF3475 33 89
IPR007700 DUF668 427 518
No external refs found!