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  5. Ala_g12717

Ala_g12717


Description : regulatory component *(PP4R3) of PP4 phosphatase complex & original description: none


Gene families : OG0002351 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12717
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT3G06670 No alias binding 0.06 OrthoFinder output from all 47 species
Adi_g020060 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.05 OrthoFinder output from all 47 species
Aev_g08027 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.05 OrthoFinder output from all 47 species
Aev_g17450 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Als_g14683 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.08 OrthoFinder output from all 47 species
Aob_g13929 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Aop_g05036 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Cba_g21800 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Ceric.06G000800.1 Ceric.06G000800 regulatory component *(PP4R3) of PP4 phosphatase complex... 0.05 OrthoFinder output from all 47 species
Dcu_g15371 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.07 OrthoFinder output from all 47 species
Ehy_g13133 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.06 OrthoFinder output from all 47 species
GSVIVT01035021001 No alias Protein modification.dephosphorylation.serine/threonine... 0.06 OrthoFinder output from all 47 species
LOC_Os01g23590.1 LOC_Os01g23590 regulatory component PP4R3 of PP4 phosphatase complex 0.04 OrthoFinder output from all 47 species
LOC_Os05g06470.1 LOC_Os05g06470 regulatory component PP4R3 of PP4 phosphatase complex 0.03 OrthoFinder output from all 47 species
Lfl_g40402 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.08 OrthoFinder output from all 47 species
MA_10436875g0010 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.03 OrthoFinder output from all 47 species
MA_10695g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g09510.1 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.03 OrthoFinder output from all 47 species
Ore_g18327 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Sam_g18621 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.02 OrthoFinder output from all 47 species
Sam_g24466 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 OrthoFinder output from all 47 species
Smo416323 No alias Protein modification.dephosphorylation.serine/threonine... 0.05 OrthoFinder output from all 47 species
Solyc01g060090.1.1 Solyc01g060090 regulatory component PP4R3 of PP4 phosphatase complex 0.03 OrthoFinder output from all 47 species
Solyc12g099320.2.1 Solyc12g099320 regulatory component PP4R3 of PP4 phosphatase complex 0.07 OrthoFinder output from all 47 species
Spa_g47196 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.04 OrthoFinder output from all 47 species
Zm00001e017588_P001 Zm00001e017588 regulatory component PP4R3 of PP4 phosphatase complex 0.1 OrthoFinder output from all 47 species
Zm00001e026266_P001 Zm00001e026266 regulatory component PP4R3 of PP4 phosphatase complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006887 P4R3-like_central_dom 177 364
No external refs found!