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  5. Ala_g12154

Ala_g12154 (LUG, RON2)


Aliases : LUG, RON2

Description : component *(LUG/LUH) of transcriptional co-repressor complex & original description: none


Gene families : OG0000790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000790_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Ala_g12154

Target Alias Description ECC score Gene Family Method Actions
Aob_g16473 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Dcu_g08942 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
LOC_Os03g64300.1 LUH, LOC_Os03g64300 transcriptional co-repressor (LUG) 0.04 OrthoFinder output from all 47 species
MA_57453g0010 LUH transcriptional co-repressor (LUG) 0.02 OrthoFinder output from all 47 species
MA_65863g0010 LUH transcriptional co-repressor (LUG) 0.03 OrthoFinder output from all 47 species
MA_99040g0010 LUG, RON2 transcriptional co-repressor (LUG) 0.03 OrthoFinder output from all 47 species
Sam_g13678 No alias component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Zm00001e027845_P004 LUG, RON2, Zm00001e027845 transcriptional co-repressor (LUG) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 608 641
IPR001680 WD40_repeat 694 725
IPR001680 WD40_repeat 443 476
IPR001680 WD40_repeat 483 519
No external refs found!