Ala_g12144


Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12144

Target Alias Description ECC score Gene Family Method Actions
AT1G32740 No alias SBP (S-ribonuclease binding protein) family protein 0.03 OrthoFinder output from all 47 species
AT3G12920 No alias SBP (S-ribonuclease binding protein) family protein 0.02 OrthoFinder output from all 47 species
AT5G45100 No alias SBP (S-ribonuclease binding protein) family protein 0.03 OrthoFinder output from all 47 species
Adi_g039739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g039740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08224 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56929 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62396.t1 SBP1, Aspi01Gene62396 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05698 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020407001 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species
GSVIVT01026248001 RING E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_07205 SBP1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_15555 No alias Probable BOI-related E3 ubiquitin-protein ligase 2... 0.02 OrthoFinder output from all 47 species
Gb_17069 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g46570.1 LOC_Os03g46570 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g33030.1 LOC_Os04g33030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g34020.1 RING, LOC_Os11g34020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g34080.1 LOC_Os11g34080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g16938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430369g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_20197g0010 SBP1 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species
MA_20558g0010 No alias BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g00907 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g03464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007211 SBP1 not classified & original description: CDS=385-1452 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018517 No alias not classified & original description: CDS=1110-2285 0.03 OrthoFinder output from all 47 species
Solyc06g061020.3.1 Solyc06g061020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g007120.3.1 Solyc08g007120 Probable BOI-related E3 ubiquitin-protein ligase 2... 0.01 OrthoFinder output from all 47 species
Spa_g06772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008274_P001 Zm00001e008274 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e012302_P001 Zm00001e012302 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!