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  5. Ala_g11975

Ala_g11975


Description : not classified & original description: none


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11975

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00187940 evm_27.TU.AmTr_v1... GBF-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G29350 No alias Kinase-related protein of unknown function (DUF1296) 0.02 OrthoFinder output from all 47 species
AT1G29370 No alias Kinase-related protein of unknown function (DUF1296) 0.02 OrthoFinder output from all 47 species
Adi_g008163 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g025128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g061004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g120900 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04421.t1 Aspi01Gene04421 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40924.t1 Aspi01Gene40924 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g32658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.04 OrthoFinder output from all 47 species
Ceric.27G004200.1 Ceric.27G004200 not classified & original description: pacid=50604818... 0.03 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.03 OrthoFinder output from all 47 species
Dac_g07091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15160 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g18699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00263 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g47430.1 LOC_Os01g47430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g06750.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g26326 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g13051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026486 No alias not classified & original description: CDS=154-2919 0.03 OrthoFinder output from all 47 species
Sam_g29505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo438753 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc05g018750.4.1 Solyc05g018750 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g045230.4.1 Solyc07g045230 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g22168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14041 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020237_P001 Zm00001e020237 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028004_P001 Zm00001e028004 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 22 80
No external refs found!