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  5. Ala_g11787

Ala_g11787 (ATCDSP32, CDSP32)


Aliases : ATCDSP32, CDSP32

Description : plastidial thioredoxin *(TrxL1) & original description: none


Gene families : OG0006806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11787
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00147850 ATCDSP32,... Thioredoxin-like protein CDSP32, chloroplastic... 0.06 OrthoFinder output from all 47 species
Adi_g078630 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.1 OrthoFinder output from all 47 species
Als_g03601 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22724 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g15470 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g12372 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22593 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.35G049800.1 ATCDSP32,... plastidial thioredoxin *(TrxL1) & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g15918 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g00891 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g21447 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g05756 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.09 OrthoFinder output from all 47 species
LOC_Os07g29410.1 ATCDSP32,... Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Len_g23803 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.11 OrthoFinder output from all 47 species
MA_99302g0010 ATCDSP32, CDSP32 Thioredoxin-like protein CDSP32, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp3g22510.1 ATCDSP32, CDSP32 Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza... 0.04 OrthoFinder output from all 47 species
Msp_g07920 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09446 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g02188 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19186 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g07440 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.1 OrthoFinder output from all 47 species
Smo67262 ATCDSP32, CDSP32 Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Spa_g04933 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g10153 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 224 312
IPR013766 Thioredoxin_domain 101 195
No external refs found!