Aliases : ATARFA1B, ARFA1B
Description : ARF-GTPase *(ARF1) & original description: none
Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00209290 | ATARFA1B, ARFA1B | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g024167 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g112037 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g07015 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g19389 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene70444.t1 | ATARFA1F,... | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G076800.1 | ATARFA1B,... | ARF-GTPase *(ARF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G047200.1 | ATARFA1B,... | ARF-GTPase *(ARF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G015600.1 | ATARFA1B,... | ARF-GTPase *(ARF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g487850 | ATARFB1B, ARFB1B | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g40902 | ATARFA1F, ARFA1F | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g02001 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g09806 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g05453 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g17402 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01013765001 | ARFA1E, ATARFA1E | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00987 | ATARFA1F, ARFA1F | ARF-GTPase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g41060.1 | ATARFA1F,... | ARF-GTPase | 0.03 | OrthoFinder output from all 47 species | |
Len_g05534 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05275 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g23069 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g31478 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp7g13050.1 | ATARFA1F, ARFA1F | ARF-GTPase | 0.02 | OrthoFinder output from all 47 species | |
Msp_g25108 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g16806 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003839 | gamma-glutamylcyclotransferase activity | IEP | HCCA |
MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | HCCA |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
MF | GO:0004620 | phospholipase activity | IEP | HCCA |
MF | GO:0004629 | phospholipase C activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
BP | GO:0006749 | glutathione metabolic process | IEP | HCCA |
BP | GO:0006751 | glutathione catabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016298 | lipase activity | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
MF | GO:0016842 | amidine-lyase activity | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043171 | peptide catabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0044273 | sulfur compound catabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006689 | Small_GTPase_ARF/SAR | 5 | 151 |
No external refs found! |