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  5. Ala_g10753

Ala_g10753


Description : not classified & original description: none


Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g10753
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Aob_g27920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035990 No alias not classified & original description: CDS=440-3595 0.03 OrthoFinder output from all 47 species
Cba_g13225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G047000.1 Ceric.13G047000 not classified & original description: pacid=50636886... 0.03 OrthoFinder output from all 47 species
Ceric.18G013200.1 Ceric.18G013200 not classified & original description: pacid=50621307... 0.03 OrthoFinder output from all 47 species
Gb_31980 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g14870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo405421 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g55806 LNG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 1019 1191
IPR032795 DUF3741-assoc 108 131
IPR022212 DUF3741 279 312
No external refs found!