Ala_g10683 (ATCSLD3, KJK, CSLD3)

Aliases : ATCSLD3, KJK, CSLD3

Description : mannan synthase *(CSLD) & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g10683
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00246190	CSLD1, ATCSLD1,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00129900	ATCSLD4, CSLD4,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AT5G16910	ATCSLD2, CSLD2	cellulose-synthase like D2	0.03	OrthoFinder output from all 47 species
AT5G64740	CESA6, PRC1, IXR2, E112	cellulose synthase 6	0.02	OrthoFinder output from all 47 species
Adi_g034293	ATCSLD3, KJK, CSLD3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g044360	ATCSLD4, CSLD4	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g059427	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082699	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g04489	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.05	OrthoFinder output from all 47 species
Als_g07048	ATCSLD3, KJK, CSLD3	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g07972	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene23400.t2	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene69637.t1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.32G060200.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g31942	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g11281	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g05085	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07119	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18189	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26383	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
GSVIVT01004458001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01013057001	ATCSLD2, CSLD2	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.04	OrthoFinder output from all 47 species
GSVIVT01021798001	CSLD1, ATCSLD1	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.02	OrthoFinder output from all 47 species
GSVIVT01024398001	ATCSLD3, KJK, CSLD3	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.02	OrthoFinder output from all 47 species
GSVIVT01030467001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Gb_02801	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Gb_25252	ATCSLE1, CSLE1	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Gb_32651	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Gb_39671	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
LOC_Os04g35030.1	CSLB04, ATCSLB4,...	Putative cellulose synthase-like protein H3 OS=Oryza...	0.02	OrthoFinder output from all 47 species
LOC_Os07g36740.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.04	OrthoFinder output from all 47 species
Len_g14991	ATCSLD4, CSLD4	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Mp2g05660.1	ATCSLD3, KJK, CSLD3	catalytic component CesA of cellulose synthase complex....	0.02	OrthoFinder output from all 47 species
Mp5g24550.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Msp_g15265	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g04994	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g08644	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g23545	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005953	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: CDS=681-4157	0.03	OrthoFinder output from all 47 species
Sam_g38935	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g51556	No alias	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Smo141535	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
Solyc03g097050.3.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.04	OrthoFinder output from all 47 species
Spa_g09428	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g16433	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g51152	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004740_P001	ATCSLD3, KJK,...	Probable mixed-linked glucan synthase 7 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Zm00001e029046_P001	CESA8, LEW2,...	Cellulose synthase A catalytic subunit 4 [UDP-forming]...	0.02	OrthoFinder output from all 47 species
Zm00001e034466_P001	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	382	1146

External Links

No external refs found!

Ala_g10683 (ATCSLD3, KJK, CSLD3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation