Ala_g10271

Description : U-Box-group-II E3 ubiquitin ligase & original description: none

Gene families : OG0004266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004266_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g10271
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00240140	evm_27.TU.AmTr_v1...	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT3G47820	PUB39	PLANT U-BOX 39	0.04	OrthoFinder output from all 47 species
Aop_g04662	PUB38, ATPUB38	U-Box-group-II E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.29G047200.1	PUB39, Ceric.29G047200	U-Box-group-II E3 ubiquitin ligase & original...	0.03	OrthoFinder output from all 47 species
Dcu_g40033	PUB38, ATPUB38	U-Box-group-II E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g03795	PUB39	U-Box-group-II E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g16204	PUB39	U-Box-group-II E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_13006	PUB38, ATPUB38	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Gb_16859	PUB38, ATPUB38	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
LOC_Os06g13080.1	PUB39, LOC_Os06g13080	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
LOC_Os06g13090.1	PUB39, LOC_Os06g13090	E3 ubiquitin ligase (PUB)	0.05	OrthoFinder output from all 47 species
MA_252170g0010	PUB38, ATPUB38	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Msp_g15300	No alias	U-Box-group-II E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Smo90666	PUB39	U-box domain-containing protein 38 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Spa_g15402	PUB38, ATPUB38	U-Box-group-II E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	393	425
IPR003613	Ubox_domain	9	73

External Links

No external refs found!

Ala_g10271

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation