Aliases : APUM2, PUM2
Description : not classified & original description: none
Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G29190 | APUM2, PUM2 | pumilio 2 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g081646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.28G029200.1 | PUM1, APUM1,... | not classified & original description: pacid=50569734... | 0.09 | OrthoFinder output from all 47 species | |
Dcu_g48916 | APUM2, PUM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g25094 | PUM1, APUM1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g13786 | APUM2, PUM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10434828g0010 | APUM2, PUM2 | Pumilio homolog 2 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
MA_23070g0010 | PUM1, APUM1 | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Mp7g16700.1 | PUM1, APUM1 | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g43012 | APUM2, PUM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g15275 | PUM1, APUM1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pp3c16_13520V3.1 | Pp3c16_13520 | pumilio 2 | 0.01 | OrthoFinder output from all 47 species | |
Smo1983 | APUM4, PUM4 | Pumilio homolog 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g076340.3.1 | APUM2, PUM2,... | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR012940 | NABP | 339 | 697 |
IPR001313 | Pumilio_RNA-bd_rpt | 817 | 841 |
IPR001313 | Pumilio_RNA-bd_rpt | 884 | 914 |
IPR001313 | Pumilio_RNA-bd_rpt | 774 | 807 |
IPR001313 | Pumilio_RNA-bd_rpt | 965 | 994 |
IPR001313 | Pumilio_RNA-bd_rpt | 919 | 952 |
IPR001313 | Pumilio_RNA-bd_rpt | 702 | 736 |
IPR001313 | Pumilio_RNA-bd_rpt | 738 | 770 |
IPR001313 | Pumilio_RNA-bd_rpt | 846 | 881 |
No external refs found! |